CAGED: cluster analysis of gene expression dynamics

CAGED is a unique Bayesian statistical tool for gene expression profiles that uses a time series approach to clustering. Markov models are used for within sequence representation and similiarity measures, such as entropy-based distances, are available for between gene sequence clustering purposes. Gene clusters are chosen on the basis of highest marginal likelihoods. CAGED is freely available after registration. For more info: http://genomethods.org/caged/