DNA Demethylation Mechanism

When AID/APOBEC creates a thymine:guanine mismatch, the base excision repair mechanism corrects this issue. This process is shown in Figure 21.

Figure 20: This mechanism highlights the reaction performed by AID/APOBEC, which deaminates 5mC, creating thymine, which will be excised by the BER machinery.

Figure 21: The BER mechanism, in which T glycosylase removes thymine from the strand, AP lyase cleaves the DNA backbone, AP endonuclease cleaves the remaining 3′ sugar group, and then repair and ligation enzymes reinsert the correctly matching cytosine base (20).

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