Software and Protocols

PyDegradome.py – python based program to identify peaks from 5′-end RNAseq data (like PAREseq)

– click link to download from PLOS Pathogens website or here to find a more recent updated version on Github

– read more about how it was used to find cleavage site for the KSHV RNase SOX – Gaglia et al. PLOS Pathogens 2015 – and for the influenza RNase PA-X – Gaucherand et al. Biorxiv 2022

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