Publications


Cammen, KM, Schultz, TF, Don Bowen, W, Hammill, MO, Puryear, WB, Runstadler, J et al.. Genomic signatures of population bottleneck and recovery in Northwest Atlantic pinnipeds. Ecol Evol. 2018;8 (13):6599-6614. doi: 10.1002/ece3.4143. PubMed PMID:30038760 PubMed Central PMC6053562.

Estrin, MA, Hussein, ITM, Puryear, WB, Kuan, AC, Artim, SC, Runstadler, JA et al.. Host-directed combinatorial RNAi improves inhibition of diverse strains of influenza A virus in human respiratory epithelial cells. PLoS ONE. 2018;13 (5):e0197246. doi: 10.1371/journal.pone.0197246. PubMed PMID:29775471 PubMed Central PMC5959063.

Desforges, JP, Bandoro, C, Shehata, L, Sonne, C, Dietz, R, Puryear, WB et al.. Environmental contaminant mixtures modulate in vitro influenza infection. Sci. Total Environ. 2018;634 :20-28. doi: 10.1016/j.scitotenv.2018.03.321. PubMed PMID:29626767 .

Lerner, JE, Ono, K, Hernandez, KM, Runstadler, JA, Puryear, WB, Polito, MJ et al.. Evaluating the use of stable isotope analysis to infer the feeding ecology of a growing US gray seal (Halichoerus grypus) population. PLoS ONE. 2018;13 (2):e0192241. doi: 10.1371/journal.pone.0192241. PubMed PMID:29466372 PubMed Central PMC5821315.

Bandoro, C, Runstadler, JA. Bacterial Lipopolysaccharide Destabilizes Influenza Viruses. mSphere. ;2 (5):. doi: 10.1128/mSphere.00267-17. PubMed PMID:29034326 PubMed Central PMC5636225.

Ramey, AM, Hill, NJ, Cline, T, Plancarte, M, De La Cruz, S, Casazza, ML et al.. Surveillance for highly pathogenic influenza A viruses in California during 2014-2015 provides insights into viral evolutionary pathways and the spatiotemporal extent of viruses in the Pacific Americas Flyway. Emerg Microbes Infect. 2017;6 (9):e80. doi: 10.1038/emi.2017.66. PubMed PMID:28874792 PubMed Central PMC5625317.

Spivey, TJ, Lindberg, MS, Meixell, BW, Smith, KR, Puryear, WB, Davis, KR et al.. Maintenance of influenza A viruses and antibody response in mallards (Anas platyrhynchos) sampled during the non-breeding season in Alaska. PLoS ONE. 2017;12 (8):e0183505. doi: 10.1371/journal.pone.0183505. PubMed PMID:28837606 PubMed Central PMC5570339.

Bui, VN, Trinh, DQ, Abao, LNB, Ozeki, Y, Runstadler, J, Nakamura, K et al.. Evaluation of the replication and pathogenicity of a variant avian paramyxovirus serotype 6 in mice. Arch. Virol. 2017;162 (10):3035-3043. doi: 10.1007/s00705-017-3459-1. PubMed PMID:28685285 .

Ballard, JR, Mickley, R, Brown, JD, Hill, NJ, Runstadler, JA, Clark, DE et al.. Detection of Wellfleet Bay Virus Antibodies in Sea Birds of the Northeastern USA. J. Wildl. Dis. 2017;53 (4):875-879. doi: 10.7589/2016-10-237. PubMed PMID:28640712 .

Hill, NJ, Hussein, IT, Davis, KR, Ma, EJ, Spivey, TJ, Ramey, AM et al.. Reassortment of Influenza A Viruses in Wild Birds in Alaska before H5 Clade 2.3.4.4 Outbreaks. Emerging Infect. Dis. 2017;23 (4):654-657. doi: 10.3201/eid2304.161668. PubMed PMID:28322698 PubMed Central PMC5367406.

Sultan, S, Bui, VN, Hill, NJ, Hussein, IT, Trinh, DQ, Inage, K et al.. Genetic characterization of H5N2 influenza viruses isolated from wild birds in Japan suggests multiple reassortment. Arch. Virol. 2016;161 (12):3309-3322. doi: 10.1007/s00705-016-3023-4. PubMed PMID:27573808 .

Puryear, WB, Keogh, M, Hill, N, Moxley, J, Josephson, E, Davis, KR et al.. Prevalence of influenza A virus in live-captured North Atlantic gray seals: a possible wild reservoir. Emerg Microbes Infect. 2016;5 (8):e81. doi: 10.1038/emi.2016.77. PubMed PMID:27485496 PubMed Central PMC5034098.

Meixell, BW, Arnold, TW, Lindberg, MS, Smith, MM, Runstadler, JA, Ramey, AM et al.. Detection, prevalence, and transmission of avian hematozoa in waterfowl at the Arctic/sub-Arctic interface: co-infections, viral interactions, and sources of variation. Parasit Vectors. 2016;9 (1):390. doi: 10.1186/s13071-016-1666-3. PubMed PMID:27387437 PubMed Central PMC4936110.

Hill, NJ, Ma, EJ, Meixell, BW, Lindberg, MS, Boyce, WM, Runstadler, JA et al.. Transmission of influenza reflects seasonality of wild birds across the annual cycle. Ecol. Lett. 2016;19 (8):915-25. doi: 10.1111/ele.12629. PubMed PMID:27324078 .

Hill, NJ, Runstadler, JA. A Bird's Eye View of Influenza A Virus Transmission: Challenges with Characterizing Both Sides of a Co-Evolutionary Dynamic. Integr. Comp. Biol. 2016;56 (2):304-16. doi: 10.1093/icb/icw055. PubMed PMID:27252222 PubMed Central PMC5964799.

Bahl, J, Pham, TT, Hill, NJ, Hussein, IT, Ma, EJ, Easterday, BC et al.. Ecosystem Interactions Underlie the Spread of Avian Influenza A Viruses with Pandemic Potential. PLoS Pathog. 2016;12 (5):e1005620. doi: 10.1371/journal.ppat.1005620. PubMed PMID:27166585 PubMed Central PMC4864295.

Ma, EJ, Hill, NJ, Zabilansky, J, Yuan, K, Runstadler, JA. Reticulate evolution is favored in influenza niche switching. Proc. Natl. Acad. Sci. U.S.A. 2016;113 (19):5335-9. doi: 10.1073/pnas.1522921113. PubMed PMID:27114508 PubMed Central PMC4868476.

Hussein, ITM, Ma, EJ, Hill, NJ, Meixell, BW, Lindberg, M, Albrecht, RA et al.. A point mutation in the polymerase protein PB2 allows a reassortant H9N2 influenza isolate of wild-bird origin to replicate in human cells. Infect. Genet. Evol. 2016;41 :279-288. doi: 10.1016/j.meegid.2016.04.011. PubMed PMID:27101787 PubMed Central PMC4868792.

Hussein, IT, Krammer, F, Ma, E, Estrin, M, Viswanathan, K, Stebbins, NW et al.. New England harbor seal H3N8 influenza virus retains avian-like receptor specificity. Sci Rep. 2016;6 :21428. doi: 10.1038/srep21428. PubMed PMID:26888262 PubMed Central PMC4757820.

Ramos, I, Mansour, M, Wohlbold, TJ, Ermler, ME, Hirsh, A, Runstadler, JA et al.. Hemagglutinin Receptor Binding of a Human Isolate of Influenza A(H10N8) Virus. Emerging Infect. Dis. 2015;21 (7):1197-201. doi: 10.3201/eid2107.141755. PubMed PMID:26079843 PubMed Central PMC4480385.

Bui, VN, Ogawa, H, Hussein, IT, Hill, NJ, Trinh, DQ, AboElkhair, M et al.. Genetic characterization of a rare H12N3 avian influenza virus isolated from a green-winged teal in Japan. Virus Genes. 2015;50 (2):316-20. doi: 10.1007/s11262-014-1162-9. PubMed PMID:25557930 .

Bui, VN, Mizutani, T, Nguyen, TH, Trinh, DQ, Awad, SS, Minoungou, GL et al.. Characterization of a genetic and antigenic variant of avian paramyxovirus 6 isolated from a migratory wild bird, the red-necked stint (Calidris ruficollis). Arch. Virol. 2014;159 (11):3101-5. doi: 10.1007/s00705-014-2162-8. PubMed PMID:25000900 .

Bui, VN, Ogawa, H, Trinh, DQ, Nguyen, TH, Pham, NT, Truong, DA et al.. Genetic characterization of an H5N1 avian influenza virus from a vaccinated duck flock in Vietnam. Virus Genes. 2014;49 (2):278-85. doi: 10.1007/s11262-014-1089-1. PubMed PMID:24880916 .

Krammer, F, Albrecht, RA, Tan, GS, Margine, I, Hai, R, Schmolke, M et al.. Divergent H7 immunogens offer protection from H7N9 virus challenge. J. Virol. 2014;88 (8):3976-85. doi: 10.1128/JVI.03095-13. PubMed PMID:24453375 PubMed Central PMC3993735.

Bui, VN, Dao, TD, Nguyen, TT, Nguyen, LT, Bui, AN, Trinh, DQ et al.. Pathogenicity of an H5N1 avian influenza virus isolated in Vietnam in 2012 and reliability of conjunctival samples for diagnosis of infection. Virus Res. 2014;179 :125-32. doi: 10.1016/j.virusres.2013.10.023. PubMed PMID:24211664 PubMed Central PMC3946877.

Wille, M, Huang, Y, Robertson, GJ, Ryan, P, Wilhelm, SI, Fifield, D et al.. Evaluation of seabirds in Newfoundland and Labrador, Canada, as hosts of influenza A viruses. J. Wildl. Dis. 2014;50 (1):98-103. doi: 10.7589/2012-10-247. PubMed PMID:24171570 .

Margine, I, Krammer, F, Hai, R, Heaton, NS, Tan, GS, Andrews, SA et al.. Hemagglutinin stalk-based universal vaccine constructs protect against group 2 influenza A viruses. J. Virol. 2013;87 (19):10435-46. doi: 10.1128/JVI.01715-13. PubMed PMID:23903831 PubMed Central PMC3807421.

Arai, Y, Bui, VN, Takeda, Y, Trinh, DQ, Nibuno, S, Runstadler, J et al.. Lung cytokine gene expression is correlated with increased severity of disease in a novel H4N8 influenza virus isolated from shorebirds. J. Vet. Med. Sci. 2013;75 (10):1341-7. . PubMed PMID:23759687 PubMed Central PMC3942933.

Runstadler, J, Hill, N, Hussein, IT, Puryear, W, Keogh, M. Connecting the study of wild influenza with the potential for pandemic disease. Infect. Genet. Evol. 2013;17 :162-87. doi: 10.1016/j.meegid.2013.02.020. PubMed PMID:23541413 PubMed Central PMC3685205.

Vernau, KM, Runstadler, JA, Brown, EA, Cameron, JM, Huson, HJ, Higgins, RJ et al.. Genome-wide association analysis identifies a mutation in the thiamine transporter 2 (SLC19A3) gene associated with Alaskan Husky encephalopathy. PLoS ONE. 2013;8 (3):e57195. doi: 10.1371/journal.pone.0057195. PubMed PMID:23469184 PubMed Central PMC3587633.

Abao, LN, Jamsransuren, D, Bui, VN, Ngo, LH, Trinh, DQ, Yamaguchi, E et al.. Surveillance and characterization of avian influenza viruses from migratory water birds in eastern Hokkaido, the northern part of Japan, 2009-2010. Virus Genes. 2013;46 (2):323-9. doi: 10.1007/s11262-012-0868-9. PubMed PMID:23264106 .

Bui, VN, Ogawa, H, Ngo, LH, Baatartsogt, T, Abao, LN, Tamaki, S et al.. H5N1 highly pathogenic avian influenza virus isolated from conjunctiva of a whooper swan with neurological signs. Arch. Virol. 2013;158 (2):451-5. doi: 10.1007/s00705-012-1502-9. PubMed PMID:23053526 .

Sivay, MV, Sayfutdinova, SG, Sharshov, KA, Alekseev, AY, Yurlov, AK, Runstadler, J et al.. Surveillance of influenza A virus in wild birds in the Asian portion of Russia in 2008. Avian Dis. 2012;56 (3):456-63. doi: 10.1637/9868-080111-Reg.1. PubMed PMID:23050460 .

Hill, NJ, Takekawa, JY, Ackerman, JT, Hobson, KA, Herring, G, Cardona, CJ et al.. Migration strategy affects avian influenza dynamics in mallards (Anas platyrhynchos). Mol. Ecol. 2012;21 (24):5986-99. doi: 10.1111/j.1365-294X.2012.05735.x. PubMed PMID:22971007 .

Girard, YA, Runstadler, JA, Aldehoff, F, Boyce, W. Genetic structure of Pacific Flyway avian influenza viruses is shaped by geographic location, host species, and sampling period. Virus Genes. 2012;44 (3):415-28. doi: 10.1007/s11262-011-0706-5. PubMed PMID:22222690 .

Bui, VN, Ogawa, H, Xininigen,, Karibe, K, Matsuo, K, Awad, SS et al.. H4N8 subtype avian influenza virus isolated from shorebirds contains a unique PB1 gene and causes severe respiratory disease in mice. Virology. 2012;423 (1):77-88. doi: 10.1016/j.virol.2011.11.019. PubMed PMID:22192630 PubMed Central PMC3253874.

Huson, HJ, vonHoldt, BM, Rimbault, M, Byers, AM, Runstadler, JA, Parker, HG et al.. Breed-specific ancestry studies and genome-wide association analysis highlight an association between the MYH9 gene and heat tolerance in Alaskan sprint racing sled dogs. Mamm. Genome. 2012;23 (1-2):178-94. doi: 10.1007/s00335-011-9374-y. PubMed PMID:22105876 PubMed Central PMC3320045.

Hill, NJ, Takekawa, JY, Cardona, CJ, Meixell, BW, Ackerman, JT, Runstadler, JA et al.. Cross-seasonal patterns of avian influenza virus in breeding and wintering migratory birds: a flyway perspective. Vector Borne Zoonotic Dis. 2012;12 (3):243-53. doi: 10.1089/vbz.2010.0246. PubMed PMID:21995264 PubMed Central PMC3300065.

Reeves, AB, Pearce, JM, Ramey, AM, Meixell, BW, Runstadler, JA. Interspecies transmission and limited persistence of low pathogenic avian influenza genomes among Alaska dabbling ducks. Infect. Genet. Evol. 2011;11 (8):2004-10. doi: 10.1016/j.meegid.2011.09.011. PubMed PMID:21964597 .

Huson, HJ, Byers, AM, Runstadler, J, Ostrander, EA. An SNP within the angiotensin-converting enzyme distinguishes between sprint and distance performing Alaskan sled dogs in a candidate gene analysis. J. Hered. ;102 Suppl 1 :S19-27. doi: 10.1093/jhered/esr022. PubMed PMID:21846742 PubMed Central PMC3157885.

Wille, M, Robertson, GJ, Whitney, H, Bishop, MA, Runstadler, JA, Lang, AS et al.. Extensive geographic mosaicism in avian influenza viruses from gulls in the northern hemisphere. PLoS ONE. 2011;6 (6):e20664. doi: 10.1371/journal.pone.0020664. PubMed PMID:21697989 PubMed Central PMC3115932.

Pearce, JM, Reeves, AB, Ramey, AM, Hupp, JW, Ip, HS, Bertram, M et al.. Interspecific exchange of avian influenza virus genes in Alaska: the influence of trans-hemispheric migratory tendency and breeding ground sympatry. Mol. Ecol. 2011;20 (5):1015-25. doi: 10.1111/j.1365-294X.2010.04908.x. PubMed PMID:21073586 PubMed Central PMC3041836.

Bui, VN, Ogawa, H, Karibe, K, Matsuo, K, Nguyen, TH, Awad, SS et al.. Surveillance of avian influenza virus in migratory water birds in eastern Hokkaido, Japan. J. Vet. Med. Sci. 2011;73 (2):209-15. . PubMed PMID:20948168 .

Huson, HJ, Parker, HG, Runstadler, J, Ostrander, EA. A genetic dissection of breed composition and performance enhancement in the Alaskan sled dog. BMC Genet. 2010;11 :71. doi: 10.1186/1471-2156-11-71. PubMed PMID:20649949 PubMed Central PMC2920855.

Dillon, D, Runstadler, J. Mx gene diversity and influenza association among five wild dabbling duck species (Anas spp.) in Alaska. Infect. Genet. Evol. 2010;10 (7):1085-93. doi: 10.1016/j.meegid.2010.07.004. PubMed PMID:20621205 PubMed Central PMC2962922.

Dugan, VG, Chen, R, Spiro, DJ, Sengamalay, N, Zaborsky, J, Ghedin, E et al.. The evolutionary genetics and emergence of avian influenza viruses in wild birds. PLoS Pathog. 2008;4 (5):e1000076. doi: 10.1371/journal.ppat.1000076. PubMed PMID:18516303 PubMed Central PMC2387073.

Wang, R, Soll, L, Dugan, V, Runstadler, J, Happ, G, Slemons, RD et al.. Examining the hemagglutinin subtype diversity among wild duck-origin influenza A viruses using ethanol-fixed cloacal swabs and a novel RT-PCR method. Virology. 2008;375 (1):182-9. doi: 10.1016/j.virol.2008.01.041. PubMed PMID:18308356 PubMed Central PMC2397557.

Lang, AS, Kelly, A, Runstadler, JA. Prevalence and diversity of avian influenza viruses in environmental reservoirs. J. Gen. Virol. 2008;89 (Pt 2):509-19. doi: 10.1099/vir.0.83369-0. PubMed PMID:18198382 .

Runstadler, JA, Happ, GM, Slemons, RD, Sheng, ZM, Gundlach, N, Petrula, M et al.. Using RRT-PCR analysis and virus isolation to determine the prevalence of avian influenza virus infections in ducks at Minto Flats State Game Refuge, Alaska, during August 2005. Arch. Virol. 2007;152 (10):1901-10. doi: 10.1007/s00705-007-0994-1. PubMed PMID:17541700 PubMed Central PMC2538573.

Runstadler, JA, Angles, JM, Pedersen, NC. Dog leucocyte antigen class II diversity and relationships among indigenous dogs of the island nations of Indonesia (Bali), Australia and New Guinea. Tissue Antigens. 2006;68 (5):418-26. doi: 10.1111/j.1399-0039.2006.00696.x. PubMed PMID:17092255 .

Runstadler, JA, Säilä, H, Savolainen, A, Leirisalo-Repo, M, Aho, K, Tuomilehto-Wolf, E et al.. Association of SLC11A1 (NRAMP1) with persistent oligoarticular and polyarticular rheumatoid factor-negative juvenile idiopathic arthritis in Finnish patients: haplotype analysis in Finnish families. Arthritis Rheum. 2005;52 (1):247-56. doi: 10.1002/art.20772. PubMed PMID:15641099 .

Tolwani, R, Hagan, C, Runstadler, J, Lyons, H, Green, S, Bouley, D et al.. Magnetic resonance imaging and surgical repair of cleft palate in a four-week-old canine (Canis familiaris): an animal model for cleft palate repair. Contemp Top Lab Anim Sci. 2004;43 (6):17-21; quiz 58. . PubMed PMID:15636550 .

Runstadler, JA, Säilä, H, Savolainen, A, Leirisalo-Repo, M, Aho, K, Tuomilehto-Wolf, E et al.. HLA-DRB1, TAP2/TAP1, and HLA-DPB1 haplotypes in Finnish juvenile idiopathic arthritis: more complexity within the MHC. Genes Immun. 2004;5 (7):562-71. doi: 10.1038/sj.gene.6364129. PubMed PMID:15343265 .

Runstadler, JA, Säilä, H, Savolainen, A, Leirisalo-Repo, M, Aho, K, Tuomilehto-Wolf, E et al.. Analysis of MHC region genetics in Finnish patients with juvenile idiopathic arthritis: evidence for different locus-specific effects in polyarticular vs pauciarticular subsets and a shared DRB1 epitope. Genes Immun. 2003;4 (5):326-35. doi: 10.1038/sj.gene.6364002. PubMed PMID:12847547 .

Oberbauer, AM, Runstadler, JA, Murray, JD, Havel, PJ. Obesity and elevated plasma leptin concentration in oMT1A-o growth hormone transgenic mice. Obes. Res. 2001;9 (1):51-8. doi: 10.1038/oby.2001.7. PubMed PMID:11346667 .

Runstadler, JA, Kocher, TD. A new antennapedia-class gene from the zebrafish. Nucleic Acids Res. 1991;19 (19):5434. . PubMed PMID:1681510 PubMed Central PMC328910.

Olson, RR, Runstadler, JA, Kocher, TD. Whose larvae?. Nature. 1991;351 (6325):357-8. doi: 10.1038/351357b0. PubMed PMID:2034285 .

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